David Li, PhD



Postdoctoral Research Fellow, University of Pennsylvania

Doctor of Philosophy, Carnegie Mellon University

Master of Science, Boston University

Bachelor of Science, Johns Hopkins University


I am a postdoctoral research fellow pursuing a tenure-track faculty position in biomedical engineering, bioengineering, mechanical engineering, and allied fields in the biomedical sciences. My research centers on the biomechanics and mechanobiology of cells and tissues, with a focus on how they intersect with metabolism and other aspects of physiology and pathology. A major thrust of my future research is on crystalline aggregates of cholesterol and cholesterol esters, which likely play critical roles in a wide range of diseases such as metabolic dysfunction-associated steatotic liver diseases (MASLD/NAFLD), atherosclerosis, and preeclampsia. These stiff crystalline aggregates likely drive disease progression through unknown, but critical, pathogenic effects on cell and tissue mechanics and mechanobiology. In addition to mechanistic studies on these topics, I aim to translate these findings into novel diagnostics and therapeutics by leveraging my unique combination of expertise in specialized imaging and biocompatible microfabrication.

My postdoctoral work in the lab of Dr. Rebecca G. Wells at the University of Pennsylvania focuses on the relationship between lipid crystallization and tissue mechanics in hepatic steatosis and fibrosis. The main thrust of my work uses multiple modes of imaging and mechanical characterization of histological features in liver tissue, along with microfabrication of model tissue systems, to determine that dietary cholesterol storage-related lipid crystal formation stiffens hepatic tissue (now published in bioRxiv). I have received the gracious support of both an NRSA T32 Postdoctoral Fellowship Award and the 2023 Postdoctoral Research Fellowship Award from the American Liver Foundation for this work.

Working with Dr. Wells and in collaboration with Dr. Paul A. Janmey, I developed a technique to associate tissue mechanics with histology at the mesoscale, and have published in FASEB Bioadvances how liver fat accumulation causes softening on the macro and meso scales. In my doctoral work with Dr. Yu-li Wang at Carnegie Mellon University, I discovered that cells coordinate collective movement through Wnt signaling, published in PNAS. While training with Dr. Joyce Y. Wong at Boston University, I studied biomimetic microfabrication of silk in collaboration with Dr. David. L. Kaplan, published in Biofabrication.

Publications

  1. Li D, Janmey PA, Wells RG (2023) Local fat content determines global and local stiffness in fatty livers. FASEB Bioadv 5:251-261.
  2. de Jong IEM, Hunt ML, Chen D, Du Y, Llewellyn J, Gupta K, Li D, Erxleben D, Rivas F, Hall AR, Furth EE, Naji A, Liu C, Dhand A, Burdick JA, Davey MG, Flake AW, Porte RJ, Russo PA, Gaynor JW, Wells RG (2023) A fetal wound healing program after intrauterine bile duct injury may contribute to biliary atresia. J Hepatol S0168-8278(23)05060-2.
  3. Loneker AE, Alisafaei F, Kant A, Li D, Janmey PA, Shenoy VB, Wells RG (2023) Lipid droplets are intracellular mechanical stressors that impair hepatocyte function. Proc Natl Acad Sci USA 120:e2216811120.
  4. Wang YL, Li D (2020) Creating Complex Polyacrylamide Hydrogel Structures Using 3D Printing with Applications to Mechanobiology. Macromol Biosci 20:2000082.
  5. Li D, Wang YL (2020) Mechanobiology, Tissue Development and Tissue Engineering. Principles of Tissue Engineering, eds Lanza R, Langer R, Vacanti JP, Atala A (Academic Press, MA), pp 237-256.
  6. Li D, Wang YL (2018) Coordination of cell migration mediated by site-dependent cell-cell contact. Proc Natl Acad Sci USA 115:10678–10683.
  7. Li D, Jacobsen MM, Rim NG, Backman D, Kaplan DL, Wong JY (2017) Introducing biomimetic shear and ion gradients to microfluidic spinning improves silk fiber strength. Biofabrication 9:025025.
  8. Jacobsen MM, Li D, Rim NG, Backman D, Smith ML, Wong JY (2017) Silk-fibronectin protein alloy fibres support cell adhesion and viability as a high strength, matrix fibre analogue. Scientific Reports 7:45653.
  9. Lin S, Ryu S, Tokareva O, Gronau G, Jacobsen MM, Huang W, Rizzo DJ, Li D, Staii C, Pugno NM, Wong JY, Kaplan DL, Buehler MJ (2015) Predictive modelling-based design and experiments for synthesis and spinning of bioinspired silk fibres. Nature Communications 6:6892.
  10. Tokareva O, Lin S, Jacobsen MM, Huang W, Rizzo DJ, Li D, Simon M, Staii C, Cebe P, Wong JY, Buehler MJ, Kaplan DL (2014) Effect of sequence features on assembly of spider silk block copolymers. Journal of Structural Biology 186:412-419.
  11. Sunshine JC, Akanda MI, Li D, Kozielski KL, Green JJ (2011) Effects of base polymer hydrophobicity and end group modification on polymeric gene delivery. Biomacromolecules 12:3592-3600.

Manuscripts in Preparation

  1. Li D, Loneker AE, Safraou Y, Ford J, Mihelc E, Levental KR, Levental I, Sack I, Janmey PA, Wells RG. Dietary cholesterol forms intrahepatic crystals and stiffens the steatotic liver. BioRxiv 2024.12.29.630682 [Preprint]. DOI: 10.1101/2024.12.29.630682.
  2. Byfield FJ, Eftekhari B, Kaymak-Loveless K, Mandal K, Li D, Wells RG, Chen W, Brujic J, Bergamaschi G, Wuite GJL, Patteson AE, Janmey PA (2024) Metabolically intact nuclei are fluidized by the activity of the chromatin remodeling motor BRG1. BioRxiv 2024.04.12.589275 [Preprint]. DOI: 10.1101/2024.04.12.589275.

Contact Me

If interested, please reach me at: David.Li@pennmedicine.upenn.example.edu

Curriculum Vitae ORCID